My research interests lie in how computational approaches can be used to understand the relationship between protein sequence, protein structure and biological function and disease. My research has focused on many aspects of computational structural bioinformatics, including both the development of new algorithms and the application of these techniques to predict the effect genetic sequence variations have on the structure, dynamics, folding and function of proteins and their involvement in the onset and proliferation of disease. I am currently applying these aprroaches to strain variation in the Influenza virus and other infectious diseases.
Publications from Elements
Journal articles
2019 (Accepted for publication)
Doi: http://doi.org/10.1128/jvi.01907-18
2019
Doi: http://doi.org/10.1099/jgv.0.001263
Doi: http://doi.org/10.1128/mBio.00307-19
2018 (Accepted for publication)
Doi: http://doi.org/10.1038/s41426-018-0100-7
2018
Doi: http://doi.org/10.1128/JVI.01413-18
2017 (Accepted for publication)
Doi: http://doi.org/10.1111/irv.12469
2017
Doi: http://doi.org/10.1093/nar/gkw857
2016
Doi: http://doi.org/10.1128/JVI.03052-15
Doi: http://doi.org/10.7554/eLife.12217
Doi: http://doi.org/10.1038/nmicrobiol.2016.58
2015
Doi: http://doi.org/10.1128/JVI.02962-14
2014
Doi: http://doi.org/10.1128/mBio.01645-14
Doi: http://doi.org/10.1371/journal.pone.0112302
Doi: http://doi.org/10.3201/eid2012.140765
Doi: http://doi.org/10.1371/journal.pone
Doi: http://doi.org/10.1128/JVI.03805-13
Doi: http://doi.org/10.1128/mBio.01070-14
Doi: http://doi.org/10.1016/j.chom.2014.05.006
Doi: http://doi.org/10.1155/2014/372491
2013
Doi: http://doi.org/10.1038/nature12476
Doi: http://doi.org/10.1371/journal.pone.0076047
Doi: http://doi.org/10.1126/science.1244730
2012
Doi: http://doi.org/10.1016/j.vaccine.2012.02.076
Doi: http://doi.org/10.1126/science.1222526
Doi: http://doi.org/10.1126/science.1213362
2011
Doi: http://doi.org/10.1073/pnas.1113801108
Doi: http://doi.org/10.1128/JVI.05319-11
2010
Doi: http://doi.org/10.1128/JVI.01136-10
2009
2008
Doi: http://doi.org/10.1074/jbc.M706207200
Doi: http://doi.org/10.1042/BJ20071122
Doi: http://doi.org/10.1186/1472-6807-8-7
2007
Doi: http://doi.org/10.1186/1471-2105-8-301
Doi: http://doi.org/10.1142/s0219720007003120
Doi: http://doi.org/10.1186/1471-2105-8-316
Doi: http://doi.org/10.1093/bioinformatics/btm073
2006
Doi: http://doi.org/10.1098/rstb.2005.1800
2005
Doi: 10.1186/1471-2105-6-s3-p12
Doi: http://doi.org/10.1093/bioinformatics/bti523
Doi: http://doi.org/10.1093/bioinformatics/bti523
Doi: http://doi.org/10.1002/prot.20755
2003
Doi: http://doi.org/10.1002/prot.10235
Doi: http://doi.org/10.1074/jbc.M301863200
2001
Doi: http://doi.org/10.1093/bioinformatics/17.8.748
Doi: http://doi.org/10.1093/protein/14.7.473
Doi: http://doi.org/10.1002/prot.1169
Doi: http://doi.org/10.1016/s0014-5793(01)02603-5
2000
Doi: http://doi.org/10.1038/35039551
Doi: http://doi.org/10.1093/bioinformatics/16.6.513
Doi: http://doi.org/10.1515/BC.2000.117
1999
Doi: http://doi.org/10.1002/(sici)1097-0134(1999)37:3+<55::aid-prot8>3.3.co;2-2
Doi: 10.1002/(sici)1097-0134(1999)37:3+<55::aid-prot8>3.0.co;2-b
1998
Doi: http://doi.org/10.1016/s0968-0004(97)01170-5
Doi: http://doi.org/10.1042/bst0260545
Doi: http://doi.org/10.1107/s0907444998007148
Doi: http://doi.org/10.1016/s0969-2126(98)00110-5
1997
1995
Doi: 10.1016/0960-894x(95)00178-v
Books
2014 (No publication date)
Conference proceedings
2002
Book chapters